@article{JSFS_2005__146_1-2_77_0, author = {Pollard, Katherine S. and Birkner, Merrill D. and Van Der Laan, Mark J. and Dudoit, Sandrine}, title = {Test statistics null distributions in multiple testing : simulation studies and applications to genomics}, journal = {Journal de la Soci\'et\'e fran\c{c}aise de statistique}, pages = {77--115}, publisher = {Soci\'et\'e fran\c{c}aise de statistique}, volume = {146}, number = {1-2}, year = {2005}, language = {en}, url = {http://www.numdam.org/item/JSFS_2005__146_1-2_77_0/} }
TY - JOUR AU - Pollard, Katherine S. AU - Birkner, Merrill D. AU - Van Der Laan, Mark J. AU - Dudoit, Sandrine TI - Test statistics null distributions in multiple testing : simulation studies and applications to genomics JO - Journal de la Société française de statistique PY - 2005 SP - 77 EP - 115 VL - 146 IS - 1-2 PB - Société française de statistique UR - http://www.numdam.org/item/JSFS_2005__146_1-2_77_0/ LA - en ID - JSFS_2005__146_1-2_77_0 ER -
%0 Journal Article %A Pollard, Katherine S. %A Birkner, Merrill D. %A Van Der Laan, Mark J. %A Dudoit, Sandrine %T Test statistics null distributions in multiple testing : simulation studies and applications to genomics %J Journal de la Société française de statistique %D 2005 %P 77-115 %V 146 %N 1-2 %I Société française de statistique %U http://www.numdam.org/item/JSFS_2005__146_1-2_77_0/ %G en %F JSFS_2005__146_1-2_77_0
Pollard, Katherine S.; Birkner, Merrill D.; Van Der Laan, Mark J.; Dudoit, Sandrine. Test statistics null distributions in multiple testing : simulation studies and applications to genomics. Journal de la Société française de statistique, Tome 146 (2005) no. 1-2, pp. 77-115. http://www.numdam.org/item/JSFS_2005__146_1-2_77_0/
Statistical methods for detecting genotype/phenotype associations in the ObeLinks Project, Technical report, Division of Biostatistics, University of California, Berkeley, (In preparation).
, , , , , ( 2005a).Multiple testing procedures and applications to genomics, Technical Report 168, Division of Biostatistics, University of California, Berkeley, URL www.bepress.com/ucbbiostat/paper168.
, , , ( 2005b).Multiple testing and data adaptive regression: An application to HIV-1 séquence data, Statistical Applications in Genetics and Molecular Biology, 4(1):Article 8, URL www.bepress.com/sagmb/vol4/iss1/art8. | MR | Zbl
, , ( 2005c).Human microRNA genes are frequently located at fragile sites and genomic regions involved in cancers, Proc. Natl. Acad. Sci., 101(9), p. 2999-3004.
, , , , , , , , , , (2004).Antisense inhibition of human miRNAs and indications for an involvement of miRNA in cell growth and apoptosis, Nucleic Acids Research, 33(4), p. 1290-1297.
, , , (2005).Multiple Testing Procedures and Applications to Genomics, Springer, (In preparation). | Zbl
, (2005).Multiple hypothesis testing in microarray experiments, Statistical Science, 18(1), p. 71-103. | MR | Zbl
, , (2003).Multiple testing procedures for controlling tail probability error rates, Technical Report 166, Division of Biostatistics, University of California, Berkeley, URL www.bepress.com/ucbbiostat/paper166. | Zbl
, , ( 2004a).Multiple testing. Part I. Single-step procédures for control of general Type I error rates, Statistical Applications in Genetics and Molecular Biology, 3(1):Article 13, URL www.bepress.com/sagmb/vol3/iss1/artl3. | MR | Zbl
, , ( 2004b).Multiple Comparison Procedures, Wiley-Interscience. | MR | Zbl
, (1987).Multiple testing methods for ChIP-Chip high density oligonucleotide array data, Technical
, , , (2004).Report 147, Division of Biostatistics, University of California, Berkeley, URL www. bepress. com/ucbbiostat/paper 147.
Controlling the number of false discoveries: Application to high-dimensional genomic data, Journal of Statistical Planning and Inference, 124(2), p. 379-398. | MR | Zbl
, , , (2004).MicroRNA expression profiles classify human cancers, Nature, 435(9), p. 834-838, URL www.broad.mit.edu/cancer/pub/miGCM.
, , , , , , , , , , , , , (2005).Reduced accumulation of specifie microRNAs in colorectal neoplasia, Molecular Cancer Research, 1(12), p. 882-891.
, , , , (2003).c-Myc-regulated microRNAs modulate E2F1 expression, Nature, 435(7043), p. 839-843.
, , , , (2005).Choice of a null distribution in resampling-based multiple testing, Journal of Statistical Planning and Inference, 125(1-2), p. 85-100. | MR | Zbl
, (2004).Bioinformatics and Computational Biology Solutions Using R and Bioconductor, chapter 13: Cluster Analysis of Genomic Data, p. 209-228, Statistics for Biology and Health, Springer-Verlag, New York, URL www.bepress.com/ucbbiostat/paper167.
, (2005).Bioinformatics and Computational Biology Solutions Using R and Bioconductor, chapter 15: Multiple Testing Procedures: The multtest Package and Applications to Genomics, p. 249-271, Statistics for Biology and Health, Springer-Verlag, New York, URL www.bepress.com/ucbbiostat/paper164.
, , (2005).A stepwise resampling method of multiple hypothesis testing, Journal of the American Statistical Association, 90(429), p. 370-378. | MR | Zbl
(1995).A permutational step-up method of testing multiple out-comes, Biometrics, 52(3), p. 846-859. | MR | Zbl
(1996).A new algorithm for hybrid hierarchical clustering with visualization and the bootstrap, Journal of Statistical Planning and Inference, 117(2), p. 275-303. | MR | Zbl
, (2003).Multiple testing. Part II. Step-down procédures for control of the family-wise error rate, Statistical Applications in Genetics and Molecular Biology, 3(l):Article 14, URL www.bepress.com/sagmb/vol3/issl/art14. | MR | Zbl
, , ( 2004a).Augmentation procedures for control of the generalized family-wise error rate and tail probabilities for the proportion of false positives, Statistical Applications in Genetics and Molecular Biology, 3(1):Article 15, URL www.bepress.com/sagmb/vol3/iss1/art15. | MR | Zbl
, , ( 2004b).Empirical Bayes and resampling based multiple testing procedure controlling tail probability of the proportion of false positives, Statistical Application in Genetics and Molecular Biology, 41(1): Article 29, URL www.bepress.com/sagmb/vol4/iss1/art29. | MR | Zbl
, , (2005).Resampling-Based Multiple Testing: Examples and Methods for p-value Adjustment, John Wiley & Sons. | Zbl
, (1993).MicroRNA function in animal development, Federation of European Biochemical Societies Letters, 579(26), p. 5911-5922.
, (2005).